STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692123Angiomotin like 2b. (692 aa)    
Predicted Functional Partners:
nf2
Neurofibromin 2a (merlin).
    
 0.946
LOC100697642
Neurofibromin 2b (merlin).
    
 0.946
patj
PATJ crumbs cell polarity complex component.
   
 0.918
I3JMB1_ORENI
Angiomotin.
    
0.915
LOC100704392
Rho GTPase activating protein 17.
    
 0.909
LOC100693200
Rho GTPase activating protein 17b.
    
 0.909
LOC100703104
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
  0.904
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
  0.904
amotl2
Angiomotin like 2a.
  
  
 
0.903
yap1
Yes-associated protein 1.
   
 0.826
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.