Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arl1ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family. (164 aa)    
Predicted Functional Partners:
golga4
Golgin A4.
    
 0.956
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.913
ciao1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
      
 0.905
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.903
stx16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.901
Gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.901
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.889
Mon2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.851
LOC100700373
ADP-ribosylation factor interacting protein 2b.
    
 0.814
LOC100704891
ADP-ribosylation factor interacting protein 2a.
    
 0.814
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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