STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708959Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
Slc39a13
Solute carrier family 39 member 13.
    
 0.866
I3JJ81_ORENI
Solute carrier family 39 member 7.
    
 0.865
SLC39A11
Solute carrier family 39 (zinc transporter), member 11.
    
 0.825
LOC100698478
Solute carrier family 39 member 14.
    
 0.785
slc39a8
Solute carrier family 39 member 8.
    
 0.785
LOC100706809
Uncharacterized protein.
    
 0.773
LOC100705175
Solute carrier family 39 member 6.
    
 0.773
SLC39A12
Solute carrier family 39 member 12.
    
 0.770
slc39a4
ZIP4_domain domain-containing protein.
    
 0.770
slc30a7
Solute carrier family 30 member 7.
   
 
 0.690
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.