STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JUI9_ORENIZgc:110366. (312 aa)    
Predicted Functional Partners:
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.744
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
     
 0.738
I3K1X8_ORENI
Zgc:92335.
    
 0.663
mmadhc
Metabolism of cobalamin associated D.
    
 0.663
gclc
Glutamate-cysteine ligase, catalytic subunit.
   
 0.660
Mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.449
mmaa
Metabolism of cobalamin associated A.
      
 0.447
lmbrd1
LMBR1 domain containing 1.
      
 0.441
sord
Sorbitol dehydrogenase.
  
 
 0.441
mmut
Methylmalonyl CoA mutase.
      
 0.437
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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