lsm6 protein (Oreochromis niloticus) - STRING interaction network

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[Homology]

Score

lsm6

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (81 aa)

Predicted Functional Partners:

lsm7

0.999

lsm1

0.999

lsm4

0.999

lsm2

0.999

Lsm8

0.999

lsm5

0.999

ENSONIP00000000466

0.998

LOC100704258

0.998

snrpd2

0.995

patl2

0.994

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000000466	Lsm8	ENSONIP00000000466	ENSONIP00000037306	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM8 homolog, U6 small nuclear RNA associated.	0.998
ENSONIP00000000466	lsm1	ENSONIP00000000466	ENSONIP00000013555	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.990
ENSONIP00000000466	lsm2	ENSONIP00000000466	ENSONIP00000024321	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
ENSONIP00000000466	lsm4	ENSONIP00000000466	ENSONIP00000016014	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
ENSONIP00000000466	lsm5	ENSONIP00000000466	ENSONIP00000078376	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm5 isoform X1.	0.998
ENSONIP00000000466	lsm6	ENSONIP00000000466	ENSONIP00000012582	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
ENSONIP00000000466	lsm7	ENSONIP00000000466	ENSONIP00000002255	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.997
ENSONIP00000000466	patl2	ENSONIP00000000466	ENSONIP00000014500	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	PAT1 homolog 2.	0.943
ENSONIP00000000466	snrpd2	ENSONIP00000000466	ENSONIP00000054582	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein Sm D2.	0.954
LOC100704258	Lsm8	ENSONIP00000026671	ENSONIP00000037306	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM8 homolog, U6 small nuclear RNA associated.	0.998
LOC100704258	lsm1	ENSONIP00000026671	ENSONIP00000013555	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.990
LOC100704258	lsm2	ENSONIP00000026671	ENSONIP00000024321	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
LOC100704258	lsm4	ENSONIP00000026671	ENSONIP00000016014	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
LOC100704258	lsm5	ENSONIP00000026671	ENSONIP00000078376	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5 isoform X1.	0.998
LOC100704258	lsm6	ENSONIP00000026671	ENSONIP00000012582	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
LOC100704258	lsm7	ENSONIP00000026671	ENSONIP00000002255	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.997
LOC100704258	patl2	ENSONIP00000026671	ENSONIP00000014500	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PAT1 homolog 2.	0.943
LOC100704258	snrpd2	ENSONIP00000026671	ENSONIP00000054582	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.954
Lsm8	ENSONIP00000000466	ENSONIP00000037306	ENSONIP00000000466	LSM8 homolog, U6 small nuclear RNA associated.	LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
Lsm8	LOC100704258	ENSONIP00000037306	ENSONIP00000026671	LSM8 homolog, U6 small nuclear RNA associated.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998