STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711094Cystatin domain-containing protein; Belongs to the cystatin family. (140 aa)    
Predicted Functional Partners:
I3KQ51_ORENI
Cystatin domain-containing protein.
    
 0.852
ENSONIP00000052170
Cathepsin B.
    
 0.585
ENSONIP00000068794
Cathepsin B.
    
 0.585
LOC100694808
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.583
LOC100706117
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.583
LOC100707845
Cathepsin Ba; Belongs to the peptidase C1 family.
    
 0.564
lgmn
Legumain.
    
 
 0.544
I3JA86_ORENI
Uncharacterized protein.
    
 0.512
LOC100696271
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.512
LOC100692041
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.512
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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