Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam160a1Family with sequence similarity 160 member A1a. (998 aa)    
Predicted Functional Partners:
aktip
Akt interacting protein.
    
 
 0.873
hook2
Hook microtubule-tethering protein 2.
    
 
 0.784
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.762
I3J3C3_ORENI
Hook microtubule-tethering protein 1.
    
 
 0.762
tnfsf13b
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
   0.758
LOC100695394
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
   0.491
brinp1
Bone morphogenetic protein/retinoic acid inducible neural-specific 1.
      
 0.434
uri1
URI1 prefoldin like chaperone.
   
  
 0.413
LOC100689735
Zgc:103625.
      
 0.410
wdr35
WD repeat-containing protein 35.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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