STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696178Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1093 aa)    
Predicted Functional Partners:
LOC100711937
WASP like actin nucleation promoting factor a.
   
 
 0.722
I3K140_ORENI
WASP like actin nucleation promoting factor b.
   
 
 0.722
was
Uncharacterized protein.
   
 
 0.722
LOC100701852
WAS/WASL interacting protein family, member 2a.
    
 
 0.666
LOC100696870
WAS/WASL-interacting protein family member 2.
    
 
 0.666
ENSONIP00000016270
Si:ch211-1o7.3.
   
 
 0.655
elp4
Elongator acetyltransferase complex subunit 4.
   
 
 0.627
elp1
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.623
elp3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
    
 
 0.623
Unc45a
Unc-45 myosin chaperone A.
    
 
 0.620
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.