STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696178Myosin IF; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1093 aa)    
Predicted Functional Partners:
ostf1
Osteoclast stimulating factor 1.
    
 0.765
LOC100711937
WASP like actin nucleation promoting factor a.
   
 
 0.737
I3K140_ORENI
WASP like actin nucleation promoting factor b.
   
 
 0.737
was
Uncharacterized protein.
   
 
 0.737
LOC100701852
WAS/WASL interacting protein family, member 2a.
   
 
 0.707
LOC100696870
WAS/WASL-interacting protein family member 2.
   
 
 0.707
Unc45a
Unc-45 myosin chaperone A.
    
 
 0.661
unc45b
Unc-45 myosin chaperone B.
    
 
 0.661
dab2
DAB adaptor protein 2.
   
  
 0.650
arpc5
Actin-related protein 2/3 complex subunit 5; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
    
 
 0.647
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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