STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwa5b2Von Willebrand factor A domain containing 5B2. (1401 aa)    
Predicted Functional Partners:
LOC100701705
Poly (ADP-ribose) glycohydrolase, like.
    
 0.693
I3KGH0_ORENI
Uncharacterized protein.
    
 0.693
LOC100712564
Poly (ADP-ribose) glycohydrolase a.
    
 0.693
xrcc5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
   
 
 0.690
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
   
 
 0.670
faap24
FA core complex associated protein 24.
     
 0.664
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.647
LOC100702930
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
    
 
 0.623
LOC100699679
H2A histone family, member Y; Belongs to the histone H2A family.
    
 
 0.623
LOC100710690
Histone PARylation factor 1.
    
 
 0.618
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.