STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prss56Serine protease 56. (892 aa)    
Predicted Functional Partners:
tmem98
Transmembrane protein 98.
      
 0.907
I3KIQ0_ORENI
Membrane frizzled-related protein.
    
 0.708
Nepro
Nucleolus and neural progenitor protein.
      
 0.679
LOC100712156
Olfactory receptor.
    
 0.644
ctdp1
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
      
 0.642
mettl11b
Methyltransferase like 11B.
      
 0.632
LOC100691977
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.575
rd3l
Uncharacterized protein.
      
 0.573
LOC102080062
Si:dkey-82o10.4.
      
 0.572
maip1
Matrix AAA peptidase interacting protein 1.
      
 0.572
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.