Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
chrngCholinergic receptor, nicotinic, gamma. (618 aa)    
Predicted Functional Partners:
LYPD6
LY6/PLAUR domain containing 6.
    
  0.918
LOC100703627
Cholinergic receptor, nicotinic, alpha 4b.
  
 
 
0.749
LOC100691234
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.723
rapsn
Receptor-associated protein of the synapse, 43kD.
   
 
 0.713
Chrna5
Cholinergic receptor, nicotinic, alpha 5.
   
 0.616
LOC100708615
Cholinergic receptor, nicotinic, beta 3b (neuronal).
   
 0.616
LOC100699752
Cholinergic receptor, nicotinic, beta polypeptide 3a.
   
 0.616
LOC100690921
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
  0.606
LOC100691407
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
  0.606
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 0.570
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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