Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
I3JV04_ORENITranslocase of outer mitochondrial membrane 20. (1232 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.960
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.959
sap130
Sin3A-associated protein a.
    
 0.950
sap30l
Sap30-like.
    
 0.948
wdr73
WD repeat domain 73.
   
 0.932
LOC100706337
WD_REPEATS_REGION domain-containing protein.
   
 0.932
LOC100711479
Retinoblastoma binding protein 4.
   
 0.932
LOC100695351
Retinoblastoma binding protein 4, like.
   
 0.932
ENSONIP00000079948
Uncharacterized protein LOC109194435 isoform X1.
   
 0.922
LOC100694309
SIN3-HDAC complex associated factor.
   
 
 0.914
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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