Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gtpbp3GTP binding protein 3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (511 aa)    
Predicted Functional Partners:
mto1
Mitochondrial tRNA translation optimization 1.
 
 0.986
trmu
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.930
ergic3
ERGIC and golgi 3.
  
 0.919
LOC100699046
Si:ch211-225b10.3.
  
 0.919
ERGIC2
ERGIC and golgi 2.
  
 0.919
ergic1
Endoplasmic reticulum-golgi intermediate compartment 1.
  
 0.919
gtpbp8
GTP binding protein 8 (putative).
    
 
 0.853
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.814
mrm3
Mitochondrial rRNA methyltransferase 3a.
   
 
 0.811
Mtg1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.802
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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