Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ano8Anoctamin. (1150 aa)    
Predicted Functional Partners:
plvap
Plasmalemma vesicle associated protein b.
      
 0.923
LOC100700820
Nuclear receptor subfamily 2, group F, member 6b.
      
 0.923
nr2f1
Nuclear receptor subfamily 2, group F, member 1a.
      
 0.791
Bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.777
LOC100711035
Hes-related family bHLH transcription factor with YRPW motif 2.
      
 0.763
FABP7
Fatty acid-binding protein 7, brain.
      
 0.688
I3JD07_ORENI
BTB (POZ) domain containing 17b.
      
 0.644
I3JWH2_ORENI
Plasmalemma vesicle associated protein a.
      
 0.643
I3JWG9_ORENI
Nuclear receptor subfamily 2, group F, member 6a.
      
 0.635
LOC100690908
Fatty acid binding protein 7, brain, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.626
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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