Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704211Zgc:85843. (376 aa)    
Predicted Functional Partners:
tspan33
Tetraspanin.
      
 0.630
LOC100697802
Patatin-like phospholipase domain containing 3.
      
 0.538
LOC100703462
Transmembrane protein 182.
      
 0.532
tmem182
Transmembrane protein 182a.
      
 0.532
LOC100697129
Uncharacterized protein.
      
 0.528
LOC100704664
Matrix-remodelling associated 8b.
      
 0.528
TIMM22
Translocase of inner mitochondrial membrane 22.
      
 0.491
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
      
 0.428
LOC100707217
AMP-binding domain-containing protein.
      
 0.425
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
      
 0.425
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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