STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTK7Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1065 aa)    
Predicted Functional Partners:
LOC100696521
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
0.710
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.710
LOC100696907
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.710
LOC100702317
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.710
habp2
Uncharacterized protein.
    
 0.702
HGFAC
HGF activator.
    
  0.701
ENSONIP00000038349
RING finger protein 223.
   
 0.677
I3IWI9_ORENI
Nerve growth factor receptor a (TNFR superfamily, member 16).
   
 0.656
LOC100701740
Macrophage stimulating 1 receptor a.
    
0.655
mst1r
Macrophage stimulating 1 receptor b.
    
0.655
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.