STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRFSerum response factor. (597 aa)    
Predicted Functional Partners:
elk4
ETS transcription factor ELK4.
    
 0.987
LOC100703163
ETS domain-containing protein Elk-3 isoform X4.
    
 0.970
I3JJ40_ORENI
SAP domain-containing protein.
    
 0.907
MYOCD
Myocardin.
    
 0.865
mrtfa
MKL/myocardin-like protein 1 isoform X2.
    
 0.787
I3KUL4_ORENI
Myocardin related transcription factor Ab.
    
 0.727
mrtfb
Myocardin related transcription factor Ba.
    
 0.727
ENSONIP00000041088
annotation not available
    
 0.727
ENSONIP00000038349
RING finger protein 223.
    
 0.662
map3k3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.625
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.