Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CirbpCold inducible RNA binding protein b. (176 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.927
LOC100706673
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.927
I3J012_ORENI
Heterogeneous nuclear ribonucleoprotein M.
   
 0.872
LOC100707309
Serine and arginine rich splicing factor 9.
   
 0.869
snrpa
Small nuclear ribonucleoprotein polypeptide A.
   
 0.825
snrpb2
Small nuclear ribonucleoprotein polypeptide B2.
   
 0.824
LOC109194311
RRM domain-containing protein.
   
 0.814
LOC100708824
RRM domain-containing protein.
   
 0.814
LOC100695900
ELAV-like protein; Belongs to the RRM elav family.
  
0.813
LOC100706107
ELAV-like protein; Belongs to the RRM elav family.
  
0.812
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (14%) [HD]