STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhdc1FH2 domain containing 1. (1181 aa)    
Predicted Functional Partners:
ENSONIP00000015292
Inverted formin-2.
 
  
 
 0.622
suox
Sulfite oxidase.
      
 0.596
ENSONIP00000038419
Profilin-2 isoform X2.
    
 0.592
LOC100700117
Profilin; Belongs to the profilin family.
    
 0.592
pfn2
Profilin; Belongs to the profilin family.
    
 0.592
I3KRI0_ORENI
Uncharacterized protein.
 
  
 
 0.546
LOC100694803
Ras homolog family member Cb.
    
 0.538
LOC100693083
Uncharacterized protein.
    
 0.538
I3K382_ORENI
Uncharacterized protein.
    
 0.538
LOC100710477
Ras homolog gene family, member Ab.
    
 0.538
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.