Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vsirV-set immunoregulatory receptor. (302 aa)    
Predicted Functional Partners:
igsf11
Immunoglobulin superfamily member 11.
     
 0.944
LOC100710403
Zgc:165604.
     
  0.916
LOC100707316
Matrix metalloproteinase-16 (membrane-inserted).
      
 0.705
Vwa8
Von Willebrand factor A domain containing 8.
      
 0.599
LOC100694913
Matrix metallopeptidase 16b (membrane-inserted).
      
 0.597
Trmt61b
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
      
 0.594
hvcn1
Hydrogen voltage-gated channel 1.
      
 0.523
faap24
FA core complex associated protein 24.
      
 0.510
LOC100701722
Uncharacterized protein.
      
 0.497
cd276
CD276 molecule.
      
 0.481
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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