Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cactinCactin. (875 aa)    
Predicted Functional Partners:
fam32a
Family with sequence similarity 32 member A.
    
 0.995
Cwc22
MI domain-containing protein.
    
 0.992
lg7hxorf56
Zgc:103697.
    
 0.992
slu7
SLU7 homolog, splicing factor.
    
 0.992
ppwd1
Peptidylprolyl isomerase domain and WD repeat containing 1.
    
  0.987
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.986
nkap
NFKB activating protein.
    
 0.984
ppil1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.984
ccdc12
Coiled-coil domain containing 12.
   
  0.983
prkrip1
PRKR interacting protein 1.
     
 0.979
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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