STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pllpPlasmolipin. (185 aa)    
Predicted Functional Partners:
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.739
LOC100694329
MARVEL domain-containing protein.
      
 0.704
tll1
Metalloendopeptidase.
   
  
 0.702
Fkbp7
Peptidylprolyl isomerase.
      
 0.701
cmtm4
CKLF-like MARVEL transmembrane domain-containing protein 4.
      
 0.673
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
      
 0.646
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.631
tpd52
Tumor protein D52.
    
 
 0.586
LOC100706613
Mal, T cell differentiation protein.
   
  
 0.556
LOC100708039
Mal, T cell differentiation protein b.
   
  
 0.556
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.