STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl2bpADP-ribosylation factor-like 2 binding protein. (205 aa)    
Predicted Functional Partners:
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
   
 0.981
cfap20
Cilia and flagella associated protein 20.
    
 
 0.791
rspry1
Ring finger and SPRY domain containing 1.
 
    
 0.633
lg11h8orf37
Uncharacterized protein.
      
 0.591
ttc8
Tetratricopeptide repeat domain 8.
   
  
 0.584
gpatch3
G patch domain containing 3.
      
 0.582
I3J1N4_ORENI
EF-hand calcium binding domain 1.
      
 0.578
Rpgr
Uncharacterized protein.
      
 0.577
LOC100707411
Zinc and ring finger 2a.
      
 0.575
eaf1
ELL associated factor 1.
      
 0.572
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.