STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smoc2SPARC related modular calcium binding 2. (429 aa)    
Predicted Functional Partners:
SIPA1L2
Signal-induced proliferation-associated 1 like 2.
      
 0.700
wdr27
Uncharacterized protein.
      
 0.684
GNG4
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.
      
 0.672
SIPA1L1
Uncharacterized protein.
      
 0.526
LOC100709511
Signal-induced proliferation-associated 1 like 1.
      
 0.526
shank2
SH3 and multiple ankyrin repeat domains 2a.
      
 0.516
tnmd
Tenomodulin.
      
 0.516
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
      
 0.515
LOC100698949
Acyl-CoA synthetase family member 2.
      
 0.514
Reep2
Receptor expression-enhancing protein 1/2/3/4.
      
 0.500
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.