STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smoc2SPARC related modular calcium binding 2. (429 aa)    
Predicted Functional Partners:
wdr27
Uncharacterized protein.
      
 0.772
SIPA1L2
Signal-induced proliferation-associated 1 like 2.
      
 0.745
GNG4
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4.
      
 0.682
slc26a5
Solute carrier family 26 member 5.
      
 0.622
msantd1
Myb/SANT-like DNA-binding domain containing 1.
      
 0.607
trappc9
Trafficking protein particle complex 9.
      
 0.589
pde10a
Phosphodiesterase.
      
 0.589
shank2
SH3 and multiple ankyrin repeat domains 2a.
      
 0.587
ENSONIP00000075133
annotation not available
      
 0.586
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
      
 0.572
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.