Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100689803Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
  
 
 0.962
LOC100707770
Serine--pyruvate aminotransferase.
  
 
 0.901
LOC100695998
Serine--pyruvate aminotransferase.
  
 
 0.901
hao1
Hydroxyacid oxidase (glycolate oxidase) 1.
  
 
 0.877
hao2
Hydroxyacid oxidase 2 (long chain).
  
 
 0.877
glyctk
Glycerate kinase.
  
 
 0.863
LOC100701752
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.854
pgp
Phosphoglycolate phosphatase; Belongs to the HAD-like hydrolase superfamily.
  
 
 0.852
dao
D-amino-acid oxidase, tandem duplicate 2.
   
 
 0.849
LOC100706625
Amine oxidase.
   
 
 0.846
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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