STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697255Engulfment and cell motility 3. (715 aa)    
Predicted Functional Partners:
I3KJ27_ORENI
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 0.993
dock5
Dedicator of cytokinesis 5; Belongs to the DOCK family.
  
 
 0.833
Dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.796
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
    
 0.796
DOCK3
Dedicator of cytokinesis 3; Belongs to the DOCK family.
    
 0.774
I3J9T5_ORENI
Uncharacterized protein; Belongs to the DOCK family.
    
 0.774
clrn3
Clarin 3.
    
 0.746
clrn2
Clarin 2.
    
 0.746
LOC100698667
Ras homolog gene family, member Gd.
    
 0.708
LOC100712402
Ras homolog family member Gb.
    
 0.708
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.