Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC100700806Cytochrome c oxidase subunit 5B, mitochondrial. (127 aa)    
Predicted Functional Partners:
LOC100701956
Cytochrome c oxidase subunit 7C.
   
 0.996
ENSONIP00000042411
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.991
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.991
LOC100706772
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.989
LOC100703964
Cytochrome c oxidase subunit 4I1.
   
 0.988
LOC100704650
Cytochrome c oxidase subunit 4I2.
   
 0.988
LOC100704109
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.987
I3J2W0_ORENI
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.983
LOC100700847
Cytochrome c oxidase subunit 7B, mitochondrial.
   
 0.981
LOC100697423
Cytochrome c oxidase subunit 7A2.
   
 0.978
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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