Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sirt1Deacetylase sirtuin-type domain-containing protein. (712 aa)    
Predicted Functional Partners:
p53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
    
 0.999
ppargc1a
PPARG coactivator 1 alpha.
   
 0.995
sirt7
Sirtuin 7.
  
 0.988
LOC100706370
Fork-head domain-containing protein.
    
 0.987
rps19bp1
Uncharacterized protein.
    
 0.986
sirt6
Sirtuin 6.
  
0.985
foxo3
Forkhead box O3b.
    
 0.984
nampt
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
     
 0.983
pparg
Peroxisome proliferator activated receptor gamma.
    
 0.977
rbp7
Nicotinamide-nucleotide adenylyltransferase.
   
 0.972
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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