STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JVM5_ORENICDK2 associated cullin domain 1; Belongs to the cullin family. (327 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
 0.985
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.940
LOC100703880
F-box and WD repeat domain containing 11a.
   
 0.922
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.873
LOC100693338
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.854
gps1
G protein pathway suppressor 1.
    
 0.851
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.849
I3JS18_ORENI
Zgc:158376.
    
 0.848
LOC100692165
Lysine (K)-specific demethylase 2Ba.
    
 0.848
LOC100701413
Lysine (K)-specific demethylase 2Aa.
    
 0.848
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.