Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
I3JVM5_ORENICDK2 associated cullin domain 1; Belongs to the cullin family. (327 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.952
ubxn7
UBX domain protein 7.
   
 0.945
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.925
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
 0.897
LOC100690293
Ubiquitin-NEDD8-like protein RUB2.
    
 0.891
LOC100711516
Ubiquitin-like protein Nedd8.
    
 0.891
LOC100703880
F-box and WD repeat domain containing 11a.
    
 0.874
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
 0.855
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.848
cul2
Cullin 2; Belongs to the cullin family.
   
 0.843
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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