STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYPNMyopalladin isoform X1. (1815 aa)    
Predicted Functional Partners:
herc4
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
      
 0.700
herc3
HECT and RLD domain containing E3 ubiquitin protein ligase 3.
      
 0.700
Fam13a
Family with sequence similarity 13 member A.
      
 0.700
wdr18
WD repeat domain 18.
   
 0.640
tex10
Testis expressed 10.
   
 0.596
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.571
I3KK23_ORENI
Nebulin.
   
 0.514
LOC100696264
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.456
ENSONIP00000032100
Calmodulin 2a (phosphorylase kinase, delta).
    
 0.440
ENSONIP00000045107
annotation not available
    
 0.440
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.