STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JVP4_ORENIUncharacterized protein. (362 aa)    
Predicted Functional Partners:
LOC100696265
Actinin, alpha 1.
    
 0.920
ACTN4
Actinin alpha 4.
    
 0.920
stau1
Staufen double-stranded RNA binding protein 1.
    
 
 0.741
Stau2
Staufen double-stranded RNA binding protein 2.
    
 
 0.741
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
   
  
 0.727
wrap73
WD repeat containing, antisense to TP73.
    
 
 0.714
celf1
Cugbp, Elav-like family member 1.
   
 
 0.669
CELF2
Cugbp, Elav-like family member 2.
   
 
 0.669
LOC100705935
Uncharacterized protein.
   
 
 0.669
LOC100690744
Nanos-type domain-containing protein; Belongs to the nanos family.
   
 
 0.630
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.