STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tial1TIA1 cytotoxic granule-associated RNA binding protein-like 1. (398 aa)    
Predicted Functional Partners:
dcp1a
Decapping mRNA 1A.
   
 
 0.712
Zmat5
Zinc finger, matrin-type 5.
   
 0.672
LOC100709252
RRM domain-containing protein.
  
 0.657
I3KAX8_ORENI
Ataxin 2.
   
 
 0.630
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.619
PABPN1L
Embryonic polyadenylate-binding protein 2 isoform X2.
  
 0.613
Pabpn1
Poly(A) binding protein, nuclear 1.
  
 0.612
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.606
snrpe
Small nuclear ribonucleoprotein E.
   
 0.605
Snrpg
Small nuclear ribonucleoprotein G.
   
 0.601
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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