Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wfdc1WAP four-disulfide core domain 1. (213 aa)    
Predicted Functional Partners:
LOC100705458
Syndecan binding protein (syntenin) 2.
      
 0.755
LOC100701103
HtrA serine peptidase 3a.
      
 0.622
Scg5
Secretogranin V.
      
 0.552
Ivns1abp
Influenza virus NS1A binding protein a.
      
 0.523
hikeshi
Heat shock protein nuclear import factor hikeshi.
      
 0.425
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.423
I3J130_ORENI
MARVEL domain-containing protein.
      
 0.423
LOC100707774
Parvalbumin 9; Belongs to the parvalbumin family.
    
 
 0.419
nmi
Uncharacterized protein.
      
 0.410
I3J8X5_ORENI
RRM domain-containing protein.
      
 0.409
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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