Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
I3JWC1_ORENIProtein phosphatase, Mg2+/Mn2+ dependent, 1F. (161 aa)    
Predicted Functional Partners:
arrdc2
Arrestin domain containing 2.
    
 
 0.756
fem1c
Fem-1 homolog c (C. elegans).
   
 
 0.727
FEM1A
Fem-1 homolog A.
   
 
 0.727
fem1b
Fem-1 homolog b (C. elegans).
   
 
 0.727
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.712
ess2
Ess-2 splicing factor homolog.
   
  
 0.707
dgcr2
DiGeorge syndrome critical region gene 2.
      
 0.702
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
  
 0.691
LOC100699103
MDS1 and EVI1 complex locus.
    
 0.685
ccdc92
Coiled-coil domain containing 92.
      
 0.682
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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