STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JWC4_ORENIATP/GTP binding protein-like 2. (847 aa)    
Predicted Functional Partners:
lxn
Latexin.
    
 
 0.611
tmem192
Transmembrane protein 192 isoform X1.
    
 
 0.580
CPQ
Carboxypeptidase Q.
      
 0.472
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.428
I3KWD9_ORENI
Tubulin tyrosine ligase-like family, member 5.
      
 0.426
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.424
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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