Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100694462CREB regulated transcription coactivator 1a. (504 aa)    
Predicted Functional Partners:
mbtps2
Membrane-bound transcription factor peptidase, site 2.
    
 0.547
mbtps1
Membrane-bound transcription factor peptidase, site 1.
    
 0.469
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
    
 0.453
LOC100697446
cAMP responsive element binding protein 1.
    
 0.440
LOC100534480
Uncharacterized protein.
    
 0.440
creb1
Uncharacterized protein.
    
 0.440
LOC100702880
Activating transcription factor 1.
    
 0.440
LOC100708638
BZIP domain-containing protein.
    
 0.440
atf6
Activating transcription factor 6.
    
 0.401
LOC100705378
BZIP domain-containing protein.
    
 0.401
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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