Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ccdc77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
lg7h18orf54
Lung adenoma susceptibility protein 2.
      
 0.827
LOC100691505
Nuclear envelope integral membrane protein 1.
   
  
 0.759
znf367
Zinc finger protein 367.
      
 0.749
cep85
Centrosomal protein 85.
   
  
 0.721
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.693
aurkaip1
Aurora kinase A interacting protein 1.
      
 0.681
cep162
Centrosomal protein 162.
   
  
 0.644
mtfr1l
Mitochondrial fission regulator 1-like.
   
  
 0.636
ccdc124
Coiled-coil domain containing 124.
      
 0.634
tubgcp2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.628
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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