STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
LOC100691505
Nuclear envelope integral membrane protein 1.
   
  
 0.618
lg7h18orf54
Lung adenoma susceptibility protein 2.
      
 0.592
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.587
cep85
Centrosomal protein 85.
      
 0.581
znf367
Zinc finger protein 367.
      
 0.571
dpt
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
  
 0.483
cep162
Centrosomal protein 162.
   
  
 0.476
aurkaip1
Aurora kinase A interacting protein 1.
      
 0.473
wdr90
WD repeat domain 90.
   
 
 0.473
ENSONIP00000035804
annotation not available
   
  
 0.467
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.