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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697979WH2 domain-containing protein. (499 aa)    
Predicted Functional Partners:
BRK1
Chromosome 3 open reading frame 10.
    
 0.970
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.965
I3KM31_ORENI
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 0.964
ABI1
Abl-interactor 1a.
   
 0.957
LOC100703100
Abl-interactor 1b.
   
 0.957
nckap1
NCK-associated protein 1.
    
 0.957
nckap1l
NCK associated protein 1 like.
    
 0.957
actb
Uncharacterized protein.
    
 0.937
LOC100711936
BAI1 associated protein 2.
    
 0.918
LOC100696811
BAI1-associated protein 2a.
    
 0.918
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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