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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696844Prostaglandin E receptor 4 (subtype EP4) c; Belongs to the G-protein coupled receptor 1 family. (482 aa)    
Predicted Functional Partners:
LOC100709658
Uncharacterized protein.
    
 0.671
LOC100710082
GNAS complex locus.
    
 0.671
GNAS
Guanine nucleotide-binding protein G(s) subunit alpha isoform X1.
    
 0.671
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
  0.571
LOC100703896
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.571
LOC100692028
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
  0.571
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
  0.571
LOC100703512
Prostaglandin E receptor 2a (subtype EP2); Belongs to the G-protein coupled receptor 1 family.
     
0.537
LOC100702054
Guanine nucleotide binding protein (G protein), beta 5b.
    
  0.463
LOC100691200
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.463
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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