STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc5gDnaJ (Hsp40) homolog, subfamily C, member 5 gamma a. (221 aa)    
Predicted Functional Partners:
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.770
ENSONIP00000078834
Heat shock 70kDa protein 1/2/6/8.
 
 0.769
ENSONIP00000027324
Heat shock 70kDa protein 1/2/6/8.
 
 0.767
HSPA8
Uncharacterized protein.
 
 0.764
LOC100696748
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.760
LOC100707311
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.759
hspb7
Heat shock protein beta-7.
   
 0.751
LOC100701982
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
  
 0.732
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.721
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.718
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.