Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gtf3c2General transcription factor IIIC, polypeptide 2, beta. (954 aa)    
Predicted Functional Partners:
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.999
gtf3c4
General transcription factor IIIC, polypeptide 4.
    
 0.999
gtf3c5
General transcription factor IIIC, polypeptide 5.
   
 0.999
gtf3c1
General transcription factor IIIC subunit 1.
   
 0.994
Gtf3c6
TFIIIC_sub6 domain-containing protein.
    
 0.994
I3KV70_ORENI
B-block_TFIIIC domain-containing protein.
   
 0.994
bdp1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.858
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 
 0.814
LOC100698875
Uncharacterized protein.
   
 
 0.814
polr3a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.773
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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