Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702499Uncharacterized protein. (646 aa)    
Predicted Functional Partners:
bcl6
BCL6A transcription repressor a.
     
  0.916
LOC100699739
Homeobox domain-containing protein.
    
 0.707
ncor2
Nuclear receptor corepressor 2.
    
 0.669
ncor1
Nuclear receptor corepressor 1.
    
 0.669
bcorl1
ANK_REP_REGION domain-containing protein.
    
 0.614
Bcor
BCL6 corepressor.
    
 0.614
I3JR83_ORENI
BCL6 corepressor.
    
 0.614
ENSONIP00000075200
annotation not available
    
 0.614
ENSONIP00000077566
annotation not available
    
 0.614
LOC100709495
Uncharacterized protein.
    
 0.603
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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