STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JX48_ORENIPotassium large conductance calcium-activated channel, subfamily M, beta member 2. (268 aa)    
Predicted Functional Partners:
I3KGU3_ORENI
Potassium calcium-activated channel subfamily M alpha 1.
    
 0.951
LOC100694992
cGMP-dependent protein kinase.
     
  0.906
LOC100705845
Potassium large conductance calcium-activated channel subfamily M beta member 2.
  
  
 
0.901
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
     
  0.900
LOC100700452
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
  0.900
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.900
LOC100699977
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.900
kcnma1
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
    
 0.535
I3JX26_ORENI
Si:dkey-21e5.1.
    
 0.475
LOC100694521
Potassium channel, subfamily T, member 1.
    
 0.475
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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