Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC102081817Si:ch211-38m6.7. (234 aa)    
Predicted Functional Partners:
I3JX48_ORENI
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.919
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
  0.916
LOC100705845
Potassium large conductance calcium-activated channel subfamily M beta member 2.
     
  0.916
LOC100699977
Uncharacterized protein; Belongs to the protein kinase superfamily.
     
  0.916
I3KGU3_ORENI
Potassium calcium-activated channel subfamily M alpha 1.
     
 0.895
kcnma1
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
     
 0.895
LOC100694992
cGMP-dependent protein kinase.
     
  0.866
LOC100707466
cGMP-dependent protein kinase.
     
  0.866
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
     
  0.805
LOC100700452
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
     
  0.805
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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