STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spata2lSpermatogenesis associated 2-like. (510 aa)    
Predicted Functional Partners:
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
    
 0.911
ENSONIP00000057115
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.911
LOC100700811
Ubiquitin carboxyl-terminal hydrolase CYLD.
    
 0.911
LOC100693654
Uncharacterized protein.
    
 0.910
sharpin
RanBP2-type domain-containing protein.
     
 0.902
ENSONIP00000008001
E3 ubiquitin-protein ligase RNF31 isoform X1.
     
 0.900
LOC100707250
Uncharacterized protein.
     
 0.900
rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
     
  0.900
LOC100708611
Sharpin and rbck1 related.
     
  0.900
spata2
Spermatogenesis associated 2.
     
 
0.900
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.