STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctn3DUF1619 domain-containing protein. (610 aa)    
Predicted Functional Partners:
b9d2
B9 domain containing 2.
    
 0.891
b9d1
B9 protein domain 1.
    
 0.873
Cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.858
mks1
MKS transition zone complex subunit 1.
    
 0.836
tmem67
Transmembrane protein 67.
   
 
 0.818
LOC100700830
Transmembrane protein 216.
     
 0.816
ENSONIP00000000898
Abelson helper integration site 1.
    
 0.798
eef2
Eukaryotic translation elongation factor 2b.
    
 0.718
LOC100702471
Tr-type G domain-containing protein.
    
 0.718
kin
Kin17 DNA and RNA binding protein.
    
 0.705
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.