STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2hUbiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.900
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.894
armc8
Armadillo repeat containing 8.
   
 
 0.890
rmnd5b
Required for meiotic nuclear division 5 homolog B.
   
 
 0.882
ENSONIP00000047919
Ubiquitin B.
   
 0.873
maea
Macrophage erythroblast attacher.
    
 
 0.855
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.847
LOC100707169
Ubiquitin-like modifier activating enzyme 3.
    
 0.847
LOC100702014
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
    
 0.841
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
    
 0.841
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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