STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmod2Uncharacterized protein. (568 aa)    
Predicted Functional Partners:
nrap
Nebulin-related anchoring protein.
   
 0.613
LOC100696264
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.586
I3KK23_ORENI
Nebulin.
   
 0.573
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.538
LOC100711584
Myozenin 2a.
   
  
 0.528
LOC100711322
Myozenin 2b.
   
  
 0.528
LOC100709026
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 
 0.467
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.467
twf1
Twinfilin actin-binding protein 1a.
   
 0.431
Tlnrd1
Talin rod domain containing 1.
     
 0.418
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.