STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3K802_ORENIUncharacterized protein. (594 aa)    
Predicted Functional Partners:
npnt
Nephronectin a.
  
  
0.902
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
LOC100692535
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
  0.900
LOC100693369
Fras1 related extracellular matrix 1b.
     
  0.800
frem1
Fras1 related extracellular matrix 1a.
     
  0.800
LOC100696095
FRAS1 related extracellular matrix 2a.
     
  0.800
I3JDS0_ORENI
FRAS1 related extracellular matrix 2b.
     
  0.800
edn1
Endothelin 1.
     
 0.493
LOC102078258
Uncharacterized protein.
     
 0.442
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.