STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691147G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (385 aa)    
Predicted Functional Partners:
ENSONIP00000061327
C-C motif chemokine 20.
   
 0.973
LOC100702816
Chemokine (C-C motif) ligand 25a.
     
 0.919
LOC100695800
Chemokine (C-C motif) receptor 9b; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
ENSONIP00000063824
annotation not available
   
 0.741
LOC100695280
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.640
LOC100709445
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.640
LOC100700187
SCY domain-containing protein.
   
 0.588
ENSONIP00000067046
C-C chemokine receptor type 2.
  
 
0.555
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
0.554
LOC100694427
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
     
0.539
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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